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Home: Papers of the Week
Annotation


Wakabayashi T, Craessaerts K, Bammens L, Bentahir M, Borgions F, Herdewijn P, Staes A, Timmerman E, Vandekerckhove J, Rubinstein E, Boucheix C, Gevaert K, De Strooper B. Analysis of the gamma-secretase interactome and validation of its association with tetraspanin-enriched microdomains. Nat Cell Biol. 2009 Nov;11(11):1340-6. PubMed Abstract

  
Comments on Paper and Primary News
  Comment by:  Lawrence Rajendran
Submitted 23 October 2009  |  Permalink Posted 23 October 2009

Another beautiful work on the biochemistry of γ-secretase complex from the group of Bart de Strooper.

This connection to tetraspanins offers key insights into the "raft" association of γ-secretase. The raft link to APP processing is very weak and highly contended. Lipid rafts are dynamic platforms that could be, to a large extent, biochemically purified by detergent extraction methods.

Typically Triton X-100 (in concentration ranging from 0.3 percent to 1 percent) insoluble fractions of membranes represent the raft fraction. However, tetraspanin microdomains (TEM) differ from the "canonical" rafts in that these are triton soluble but are insoluble to other milder detergents such as CHAPS or BRIJ. This study clearly demonstrates a direct link between tetraspanin microdomains and γ-secretase, thereby providing evidence that much of the γ-secretase activity is probably confined to tetraspanin microdomains.

An (obvious) interesting question is, How about Notch cleavage? While γ-secretase cleavage of β-CTF seems to depend on its interaction with the tetraspanin web, it...  Read more


  Comment by:  Michael Wolfe, ARF Advisor
Submitted 23 October 2009  |  Permalink Posted 23 October 2009

This is an excellent study by the De Strooper lab, using a biochemical approach to identify proteins that associate with the γ-secretase complex. The work was rigorously done, with important controls to identify interactions specific to γ-secretase (e.g., parallel purification of the presenilin-like protease SPPL3). The authors confirm several proteins previously reported to interact with γ-secretase, such as TMP21, β-catenin and Rab11, further strengthening confidence in their method. Most interesting was the identification of tetraspanin proteins, which are important in many basic cellular activities, including formation of certain lipid raft-like microdomains. Indeed, γ-secretase components co-distribute with tetraspanin proteins in a sucrose density gradient.

Knockdown of certain associated tetraspanin-web proteins by RNAi led to modest but significant decreases in amyloid-β-protein levels and increases in APP C-terminal fragments that are γ-secretase substrates. Conversely, overexpression can lead to increased amyloid production.

Overall, these findings are...  Read more


  Comment by:  Kumar Sambamurti
Submitted 26 October 2009  |  Permalink Posted 27 October 2009
  I recommend this paper

This represents a careful and significant study with clean results. It probably explains why γsecretase loses activity in Triton-X100 and helps in a more thorough functional characterization of the enzyme.

View all comments by Kumar Sambamurti
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REAGENTS/MATERIAL:
Antibodies against PS1 (B19.4), Aph-1a (B80.3), Pen‑2 (B126.2), APP (B63.9), ADAM10 (B42.1), NCT (9C3), EWI‑F (1F11), EWI‑2 (8A12), CD81 (MT81, TS81, 5A6) and CD9 (4.1F12, TS9). Anti-Myc (9E10) and preimmune serum of corresponding antibodies were used as isotype controls for immunoprecipitation or antibody incubation experiments. Anti-PS1 (PS1-loop) was from Chemicon; anti‑Aβ N‑term (W0‑2) from The Genetics Company; anti‑Aβ N‑term (82E1) from Demeditec Diagnostics; anti-Flag (M2) and anti‑β-actin from Sigma Aldrich; anti-CD81, anti-CD9, anti-CD98hc (M20 4F2 SLC382) and anti-caveolin‑1 from Santa Cruz; anti-calnexin from Transduction lab and anti‑N-cadherin from BD Biosciences. Anti-Syndecan‑3 was provided by G. David (Katholieke Universiteit Leuven, Belgium), and anti-APLP2 CT12 by G. Thinakaran (University of Chicago, US).

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