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Home: Papers of the Week
Annotation


Honbou K, Suzuki NN, Horiuchi M, Niki T, Taira T, Ariga H, Inagaki F. The crystal structure of DJ-1, a protein related to male fertility and Parkinson's disease. J Biol Chem. 2003 Aug 15;278(33):31380-4. PubMed Abstract

  
Comments on Paper and Primary News
  Primary News: Spotlight on the DJ: Crystal Structure Solved of Parkinson's Protein

Comment by:  Rajiv Ratan
Submitted 13 June 2003  |  Permalink Posted 13 June 2003

From the standpoint of someone who is interested in oxidative stress signaling, the crystal structure raises several interesting possibilities. First, the conversion of cys-53 to a cys-sulfinic acid is reminiscent of the change that occurs in the prokaryotic transcription factor OxyR in response to hydroperoxide in bacteria. In that scheme, hydrogen peroxide modifies cys-199. This leads to a conformational change in the OxyR protein, which allows transcription of genes that compensate for oxidative stress. OxyR is thus the prototypic redox sensor. It is possible that DJ-1 also functions as a redox sensor.

If peroxide levels drift above a homeostatic threshold, then cys53 gets converted to a sulfinic acid, leading to a conformational change and an activation of protease activity. One consequence of this activation would be to activate the androgen receptor or other transcription factors as a compensatory response. Another possibility is that DJ-1 controls not survival, but executes death, and that DJ-1, like caspases or calpains, is involved in selective proteolytic cleavage...  Read more


  Primary News: Spotlight on the DJ: Crystal Structure Solved of Parkinson's Protein

Comment by:  Vincenzo Bonifati
Submitted 13 June 2003  |  Permalink Posted 13 June 2003

These papers are important steps forward to clarify the exact function of DJ-1, and, in turn, to promote understanding of the pathogenesis of DJ-1-related and of classical Parkinson's disease.

These studies report the crystal structure of human DJ-1, identifying a putative active site, and comparing the structure with other members of the DJ-1-ThiJ-PfpI superfamily.

An important finding in both studies is that DJ-1 is able to form dimers. Moreover, both studies confirm that the residue mutated in the PARK7 patients (L166) is located in an a-helix region, and that the mutation (L166P) appears to induce severe structural consequences. If other disease-linked missense mutations in DJ-1 are identified, they will pinpoint other functionally important domains. This would complement the biochemical and structural biology studies in the common effort to elucidate the role of this fascinating protein.

View all comments by Vincenzo Bonifati


  Primary News: Spotlight on the DJ: Crystal Structure Solved of Parkinson's Protein

Comment by:  Mark Cookson
Submitted 16 June 2003  |  Permalink Posted 16 June 2003

The solution of the crystal structure of DJ-1 is indeed a great step forward, and the localisation of the L166P mutation is very helpful. Vincenzo Bonifati and colleagues suggested that this might be in a helical region in their Science paper, and it is reassuring to see the crystal structure agree with their predictions. A word of caution is warranted, however, about the interpretation of structural data in terms of what it tells us about function. As Tom Fagan points out, a catalytic triad has not been identified. Crucially, the idea that DJ1 might have protease (or kinase) activity still needs to be tested. This leads to a bigger issue. Numerous cases are known of structural homologues with low sequence homology, and of many sequence homologues, all of which have very diverse functions. Therefore, arguing for function based on sequence or structural homology is weak. A key experiment now is to purify DJ1 and assay for a variety of possible activities, a list that I suggest should include: protease (caspase-like and serine protease-like), kinase, amidotransferase, and...  Read more
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