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6 March 2009. TAR DNA binding protein-43 has risen from relative obscurity just a few years ago to become a superstar in studies of frontotemporal lobar degeneration and amyotrophic lateral sclerosis. In 2006, scientists reported that TDP-43 inclusions are a hallmark of both diseases (Neumann et al., 2006). Last year, researchers discovered multiple TARDBP mutations in people with familial ALS (see ARF related news story, Gitcho et al., 2008, and Sreedharan et al., 2008), and since then, rapid-fire new data about the genetics and pathology of TDP-43 proteinopathy have kept the protein at the forefront of research.
Key to future TDP-43 studies will be rodent models that overexpress the protein. Scientists from the Louisiana State University Health Sciences Center in Shreveport reported the first such model in a paper published online February 17 in Molecular Therapy. First author Jason Tatom, principal investigator Ronald Klein, and colleagues injected an adeno-associated virus vector bearing the wild-type human TARDBP gene into the substantia nigra of rats. The animals then expressed approximately three times the normal amount of TDP-43 in the nigra and developed some characteristics of human TDP-43 disease. Primarily a nuclear protein, TDP-43 moved into the cytoplasm in approximately 1 percent of transduced cells. The excess TDP-43 was toxic to dopaminergic neurons.
“I thought it was a good first effort at modeling TDP-43 pathology in an animal,” said Brian Kraemer of the University of Washington in Seattle, who was not involved in the study. “The fact that they saw toxicity with wild-type TDP-43 is encouraging,” he said, because the majority of patients who exhibit TDP-43 inclusions do not have mutations in the gene.
“Having an AAV-based TDP-43 rodent model is not a substitution for a rodent model with stable germline transmission,” Samir Kumar-Singh of VIB—University of Antwerp, Belgium, also not involved in the study, wrote in an e-mail to ARF (see full comment below). “But until these models are developed, expression of TDP-43 by AAV-mediated somatic cell transfer approaches will continue to shed light on TDP-43-mediated disease mechanisms.”
At Washington University in St. Louis, Missouri, scientists are working on modeling a specific subset of TDP-43 diseases, that is, frontotemporal lobar degeneration due to a mutation in the valosin-containing protein (VCP) gene. Mutations in this gene are rare; principal investigator Nigel Cairns estimates they exist in approximately 20 American families. The mutations cause FTLD with inclusion body myopathy and Paget disease of bone. VCP has a number of cellular functions. It acts as a co-chaperone for the membrane fusion machinery, mediates endoplasmic reticulum-associated degradation of proteins, and plays a role in cell survival. Cairns, first author Michael Gitcho, and colleagues surveyed how VCP mutations affected various cellular processes. Their work appeared online February 23 in the Journal of Biological Chemistry. Expressing VCP mutants in neuroblastoma cells altered TDP-43 localization, sending it into the cytoplasm, as happens in human disease. The mutations also decreased proteasome activity, and ultimately killed cells.
On the human genetics front, the number of known TARDBP mutations continues to climb; last month, two Italian groups announced new ones in people with ALS. Writing February 17 in Human Mutation online, Lucia Corrado of the University of Eastern Piedmont in Novara, Italy, and colleagues reported nine new mutations. Two of those mutations were also discovered by Roberto Del Bo of the University of Milan and colleagues, whose own results were released online February 19 by the European Journal of Neurology.
TDP-43 offers researchers plenty to think about, and some suggest it is the central feature in a single disorder whose spectrum spans both FTLD and ALS (Geser et al., 2009 and see ARF related news story). Others are holding their applause as they wait for more evidence. “Are we at the point where we want to say that TDP-43 is the β amyloid of frontotemporal dementia?” asked Conrad Weihl, also of Washington University, who was not involved with the current research. “I’m worried that people are jumping to that conclusion,” although, he admitted, “It may well be correct.”—Amber Dance.
References:
Tatom JB, Wang DB, Dayton RD, Skalli O, Hutton ML, Dickson DW, Klein RL. Mimicking aspects of frontotemporal lobal degeneration and Lou Gehrig’s disease in rats via TDP-43 expression. Mol Ther 2009 Feb 17 [Epub ahead of print]. Abstract
Gitcho MA, Strider J, Carter D, Taylor-Reinwald L, Forman MS, Goate AM, Cairns AM. VCP mutations causing frontotemporal lobar degeneration disrupt localization of TDP-43 and induce cell death. J Biol Chem 2009 Feb 23 [Epub ahead of print]. Abstract
Corrado L, Ratti A, Gellera C, Buratti E, Castellotti B, Carlomagno Y, Ticozzi N, Mazzini L, Testa L, Taroni F, Baralle FE, Silani V, D’Alfonso S. High frequency of TARDBP gene mutations in Italian patients with amyotrophic lateral sclerosis. Hum Mutat 2009 Feb 17 [Epub ahead of print]. Abstract
Del Bo R, Ghezzi S, Corti S, Pandolfo M, Ranieri M, Santoro D, Ghione I, Prelle A, Orsetti V, Mancuso M, Sorarù G, Briani C, Angelini C, Siciliano G, Bresolin N, Comi GP. TARDBP(TDP-43) sequence analysis in patients with familial and sporadic ALS: identification of two novel mutations. Eur J Neurol 2009 Feb 19 [Epub ahead of print]. Abstract
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Primary Papers: Mimicking aspects of frontotemporal lobar degeneration and Lou Gehrig's disease in rats via TDP-43 overexpression.
Comment by: Samir Kumar-Singh
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Submitted 7 March 2009
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Posted 7 March 2009
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The issue of whether overexpression of wild-type TDP-43 in rodent brain could be neurotoxic is neatly brought out in this paper from the group of Ronald Klein with senior authors Dennis Dickson and Mike Hutton. Using an adeno-associated virus type 9 (AAV9) vector for human TDP-43 expression by stereotactic injection into the rat substantia nigra (SN), Tatom and colleagues show that overexpression of human wild-type TDP-43 on its own can kill dopaminergic neurons in rats in a dose-dependent manner (Tatom et al., 2009).
This approach is surely welcome at a time when many laboratories are struggling to get a decent TDP-43 expression in transgenic germlines. The reason why this is problematic is made apparent by this paper, where (roughly estimated) threefold wild-type TDP-43 overexpression almost completely wipes out the targeted neurons accompanied by neurodegeneration-related astro- and microgliosis. TDP-43 was selectively expressed in neurons as AAV9 has a natural neurotropism, perhaps due to the virus capsid (Bartlett et al., 1998); and while SN is chosen for sake of...
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The issue of whether overexpression of wild-type TDP-43 in rodent brain could be neurotoxic is neatly brought out in this paper from the group of Ronald Klein with senior authors Dennis Dickson and Mike Hutton. Using an adeno-associated virus type 9 (AAV9) vector for human TDP-43 expression by stereotactic injection into the rat substantia nigra (SN), Tatom and colleagues show that overexpression of human wild-type TDP-43 on its own can kill dopaminergic neurons in rats in a dose-dependent manner (Tatom et al., 2009).
This approach is surely welcome at a time when many laboratories are struggling to get a decent TDP-43 expression in transgenic germlines. The reason why this is problematic is made apparent by this paper, where (roughly estimated) threefold wild-type TDP-43 overexpression almost completely wipes out the targeted neurons accompanied by neurodegeneration-related astro- and microgliosis. TDP-43 was selectively expressed in neurons as AAV9 has a natural neurotropism, perhaps due to the virus capsid (Bartlett et al., 1998); and while SN is chosen for sake of convenience allowing a rapid estimation of neuronal loss and behavior deficit, it is not without relevance. TDP-43 is naturally expressed in this brain region, and TDP-43 pathology is observed in the nigrostriatal pathway in a variety of neurodegenerative diseases.
The descriptive neuropathology is fascinating to read. The transgenic protein predominantly homes to the neuronal nuclei, but in approximately 1 percent of the neurons, diffuse cytoplasmic TDP-43 accumulations are also observed. Occasionally, granular textures are observed that are indicative of pre-inclusion lesions as expected at 4 weeks of disease duration. One of the pathological hallmarks of diseased neurons in ALS and FTLD-TDP patients (FTLD-U in the old terminology) is redistribution of TDP-43 from its normal nuclear localization to the cytoplasm, where it is phosphorylated and ubiquitinated and forms insoluble aggregates.
Interestingly, ubiquitin labeling was also observed in neuronal cytoplasm. It is not clear what proportion of neurons were labeled or whether it co-localized with TDP-43, but given that it was not observed in the contralateral, uninjected side, it is very likely that it is the transgenic TDP-43 protein that is ubiquitinated. It will be interesting to study whether TDP-43 is phosphorylated and/or cleaved into the disease-characteristic ~25-kDa C-terminal fragments. This would further strengthen the justification of trying to develop a rodent model of TDP-43 proteinopathy.
At present the mechanism for TDP-43 dose-related neurodegeneration is unclear. Even so, considering the various important physiological functions of TDP-43 and a tight control on its expression levels, these data are not surprising. Of relevance to the majority of ALS and FTLD-TDP patients is that it is the wild-type TDP-43 protein that is accumulating and causing neurotoxicity. Given the speed at which these studies could be accomplished, it would be very interesting to study whether a similar overexpression of TDP-43 C-terminus recapitulates key features of TDP-43 proteinopathy in rat brain, as has been shown recently in cell cultures (Igaz et al., 2009).
Lastly, having an AAV-based TDP-43 rodent model is not a substitute for a rodent model with stable germline transmission achieved by either a constitutive or inducible expression system. That amongst all would allow us to understand which neurons are more vulnerable to TDP-43 gene dosage. But until these models are developed, expression of TDP-43 by AAV-mediated somatic cell transfer approaches will continue to shed light on TDP-43 mediated disease mechanisms.
References: Bartlett JS, Samulski RJ, McCown TJ. Selective and rapid uptake of adeno-associated virus type 2 in brain. Hum Gene Ther. 1998 May 20;9(8):1181-6. Abstract
Igaz LM, Kwong LK, Chen-Plotkin A, Winton MJ, Unger TL, Xu Y, Neumann M, Trojanowski JQ, Lee VM. Expression Of TDP-43 C-terminal fragments in vitro recapitulates pathological features of TDP-43 proteinopathies. J Biol Chem. 2009 Jan 21; Abstract
Tatom JB, Wang DB, Dayton RD, Skalli O, Hutton ML, Dickson DW, Klein RL. Mimicking Aspects of Frontotemporal Lobar Degeneration and Lou Gehrig's Disease in Rats via TDP-43 Overexpression. Mol Ther. 2009 Feb 17; Abstract
View all comments by Samir Kumar-Singh
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Comments on Related News |
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Related News: New Gene for ALS: RNA Regulation May Be Common Culprit
Comment by: Robert Bowser
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Submitted 27 February 2009
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Posted 27 February 2009
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These papers represent exciting work describing a new genetic mutation associated with familial ALS. The results further highlight the importance for RNA processing in at least familial forms of motor neuron disease. Much work remains to determine the exact mechanisms by which FUS modulates motor neuron survival. It may be related to that of TDP-43. However, the lack of cytoplasmic aggregation of TDP-43, and rare ubiquitin inclusions in the patients with FUS mutations, suggest the mechanisms may be distinct. It is interesting that FUS protein did not accumulate in the cytoplasm of motor neurons in sporadic ALS patients, again suggestive that the pathogenic mechanisms of mutant FUS-induced motor neuron degeneration may be distinct from that in sporadic ALS. View all comments by Robert Bowser
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Related News: New Gene for ALS: RNA Regulation May Be Common Culprit
Comment by: Eric Frank
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Submitted 27 February 2009
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Posted 27 February 2009
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These studies raise interesting questions about whether one problem in ALS and perhaps other neurodegenerative diseases is that RNA trafficking proteins fail to properly deliver RNAs to dendritic spines. The paper by Kwiatkowski et al. reports evidence that wild-type FUS and TDP-43 may be involved in transporting RNA into dendrites, where it mediates local protein synthesis that can be stimulated by neural activity. The clumping of the mutant form described by both new papers could therefore perturb the transport of RNA. Local protein synthesis in dendrites plays a major role in the activity-dependent modulation of synaptic strength. Changes in synaptic activity have been recently reported in the mouse model of SOD1 mutation ( van Zundert et al., 2008), so it will be worthwhile to examine this issue in the FUS mice that will certainly be developed by these investigators.
View all comments by Eric Frank
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Related News: New Gene for ALS: RNA Regulation May Be Common Culprit
Comment by: Jeffrey D. Rothstein
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Submitted 2 March 2009
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Posted 2 March 2009
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This is an extremely exiting story in the understanding of ALS pathogenesis. It actually it dates back to 1998—with the first description of mRNA processing errors in sporadic ALS ( Lin et al., 1998), which, interestingly, was made not in the SOD1 mouse model. At the same time, the spinal muscular atrophy gene was discovered. SMA is not unlike a childhood ALS, though predominately lower motor neurons are affected in that disease. The SMA gene defect is involved in RNA metabolism. So for the next 10 years, the SMA field has investigated the pathobiology of the defective protein. At the time it made the link between sporadic ALS and the SMA story intriguing. But there was no clear genetic link (or cause for the changes in sporadic ALS).
Feed forward to 2008, when Chris Shaw and others found a true genetic defect in RNA metabolism-based protein TDP-43. (Of course more work needs to be done on that.) And now another gene by the Shaw group, and now verified by the group in Boston, does set a string of targets that all focus on RNA...
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This is an extremely exiting story in the understanding of ALS pathogenesis. It actually it dates back to 1998—with the first description of mRNA processing errors in sporadic ALS ( Lin et al., 1998), which, interestingly, was made not in the SOD1 mouse model. At the same time, the spinal muscular atrophy gene was discovered. SMA is not unlike a childhood ALS, though predominately lower motor neurons are affected in that disease. The SMA gene defect is involved in RNA metabolism. So for the next 10 years, the SMA field has investigated the pathobiology of the defective protein. At the time it made the link between sporadic ALS and the SMA story intriguing. But there was no clear genetic link (or cause for the changes in sporadic ALS).
Feed forward to 2008, when Chris Shaw and others found a true genetic defect in RNA metabolism-based protein TDP-43. (Of course more work needs to be done on that.) And now another gene by the Shaw group, and now verified by the group in Boston, does set a string of targets that all focus on RNA metabolism and (lower) motor neurons.
By the way, all these cases appear to predominately involve a lower motor neuron form of ALS. The hint from genetics does suggest more of a loss of function rather than gain, but cell biology will ultimately sort that out. We certainly await the generation of mouse or fly models, which are now well underway for TDP-43. However, this may be a particularly difficult target for specific, non-toxic drug therapy.
View all comments by Jeffrey D. Rothstein
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Related News: New Gene for ALS: RNA Regulation May Be Common Culprit
Comment by: P. Hande Ozdinler
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Submitted 17 March 2009
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Posted 17 March 2009
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These back-to-back papers on the identification of FUS (fused in sarcoma) gene as a new genetic component of ALS open a new era of research and direct our attention to mRNA biology with respect to disease. After the first identification of mRNA processing errors in ALS patients (Lin, Bristol et al., 1998), the discovery of TDP-43 (Neumann, Sampathu et al., 2006) and now the FUS gene clearly indicate the importance of mRNA management in neurodegenerative diseases. Defects in RNA transcription, splicing, and trafficking may be the reason for cell-type-specific degeneration of motor neurons in ALS. Motor neurons both in the cortex and spinal cord are very large excitatory neurons that extend long axons to their targets and require high levels of energy and protein integrity for survival and function. Defects in transcriptional mechanisms may result in splicing defects, which could give rise to formation of non-functional proteins that would deplete the pool of required proteins for cellular function, and these non-functional proteins may form aggregates that are toxic to neurons. In...
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These back-to-back papers on the identification of FUS (fused in sarcoma) gene as a new genetic component of ALS open a new era of research and direct our attention to mRNA biology with respect to disease. After the first identification of mRNA processing errors in ALS patients (Lin, Bristol et al., 1998), the discovery of TDP-43 (Neumann, Sampathu et al., 2006) and now the FUS gene clearly indicate the importance of mRNA management in neurodegenerative diseases. Defects in RNA transcription, splicing, and trafficking may be the reason for cell-type-specific degeneration of motor neurons in ALS. Motor neurons both in the cortex and spinal cord are very large excitatory neurons that extend long axons to their targets and require high levels of energy and protein integrity for survival and function. Defects in transcriptional mechanisms may result in splicing defects, which could give rise to formation of non-functional proteins that would deplete the pool of required proteins for cellular function, and these non-functional proteins may form aggregates that are toxic to neurons. In addition, defects in the trafficking of mRNA may lead to depletion of key proteins that are in high demand locally for motor neuron function. But if FUS has a general function in mRNA transcription, splicing, and trafficking, why do mutations in this gene cause ALS and not other neurodegenerative diseases? What makes motor neurons more vulnerable in the presence of defective FUS? It could be true that in motor neurons FUS controls the transcription of a distinct set of mRNA that is expressed in a cell-type-specific manner in motor neurons, or that FUS controls the production of a key protein that is highly required in motor neurons when compared to other cell-types, and thus motor neurons may become vulnerable first. FUS seems to be the tip of the iceberg. Finding effectors, binding partners including mRNA, may lead to the identification of key components of both familial and sporadic ALS. More work is on the way!
References: Kneussel M. Dynamic regulation of GABA(A) receptors at synaptic sites. Brain Res Brain Res Rev. 2002 Jun ;39(1):74-83. Abstract
Lin CL, Bristol LA, Jin L, Dykes-Hoberg M, Crawford T, Clawson L, Rothstein JD. Aberrant RNA processing in a neurodegenerative disease: the cause for absent EAAT2, a glutamate transporter, in amyotrophic lateral sclerosis. Neuron. 1998 Mar;20(3):589-602. Abstract
Neumann M, Sampathu DM, Kwong LK, Truax AC, Micsenyi MC, Chou TT, Bruce J, Schuck T, Grossman M, Clark CM, McCluskey LF, Miller BL, Masliah E, Mackenzie IR, Feldman H, Feiden W, Kretzschmar HA, Trojanowski JQ, Lee VM. Ubiquitinated TDP-43 in frontotemporal lobar degeneration and amyotrophic lateral sclerosis. Science. 2006 Oct 6;314(5796):130-3. Abstract
Vance C, Rogelj B, Hortobágyi T, De Vos KJ, Nishimura AL, Sreedharan J, Hu X, Smith B, Ruddy D, Wright P, Ganesalingam J, Williams KL, Tripathi V, Al-Saraj S, Al-Chalabi A, Leigh PN, Blair IP, Nicholson G, de Belleroche J, Gallo JM, Miller CC, Shaw CE. Mutations in FUS, an RNA processing protein, cause familial amyotrophic lateral sclerosis type 6. Science. 2009 Feb 27;323(5918):1208-11. Abstract
View all comments by P. Hande Ozdinler
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Related News: Meet the First Published TDP-43 Mouse
Comment by: Samir Kumar-Singh
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Submitted 16 October 2009
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Posted 16 October 2009
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This study elegantly gives a first insight on a transgenic mouse model of mutant TDP-43 (A315T) identified in familial ALS patients. For those in the field, it is clear that generating these mouse models is a mammoth task on its own. Among the many interesting findings in this paper, the first to catch my attention was that the 25-kDa TDP-43 C-terminal fragments (CTFs) were recovered from detergent-soluble fractions but not from urea fractions as observed in sporadic and familial ALS/FTLD patients. If the TDP-43 25-kDa CTFs would indeed be confirmed as the real culprit, this would yet again emphasize the importance of soluble but not aggregated protein/peptide in cellular toxicity, as has been shown for a number of other proteinopathies including Aβ, α-synuclein, polyglutamine expansion in Huntingtin, and mutant SOD1.
Another important observation made in this paper was that ubiquitin-immunoreactive (ir) inclusions observed in select neurons including motor neurons were not TDP-43-ir. Thus, the mutant TDP-43 (A315T) mice do not completely model ALS, where...
Read more
This study elegantly gives a first insight on a transgenic mouse model of mutant TDP-43 (A315T) identified in familial ALS patients. For those in the field, it is clear that generating these mouse models is a mammoth task on its own. Among the many interesting findings in this paper, the first to catch my attention was that the 25-kDa TDP-43 C-terminal fragments (CTFs) were recovered from detergent-soluble fractions but not from urea fractions as observed in sporadic and familial ALS/FTLD patients. If the TDP-43 25-kDa CTFs would indeed be confirmed as the real culprit, this would yet again emphasize the importance of soluble but not aggregated protein/peptide in cellular toxicity, as has been shown for a number of other proteinopathies including Aβ, α-synuclein, polyglutamine expansion in Huntingtin, and mutant SOD1.
Another important observation made in this paper was that ubiquitin-immunoreactive (ir) inclusions observed in select neurons including motor neurons were not TDP-43-ir. Thus, the mutant TDP-43 (A315T) mice do not completely model ALS, where ubiquitin-ir inclusions are also TDP-43-ir; nevertheless, this work does lead to a very interesting question: what are these inclusions composed of?
Knowing earlier studies (see Tatom et al., 2009 and ARF related news story), I am also not surprised at the glaring omission of wild-type TDP-43 mice as a better control than the non-transgenic mice utilized in this study. So although clearly not all is answered yet, let's see how these and other TDP-43 mouse models currently being developed will unfold the mysteries of TDP-43-led neurodegeneration.
View all comments by Samir Kumar-Singh
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