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Novel Aβ Protease Found in Mitochondria
27 July 2006. A mitochondrial matrix protease, which degrades short targeting sequences left over after protein import, can also destroy amyloid-β (Aβ) peptides, according to a paper published online July 18 in the Journal of Biological Chemistry. Elzbieta Glaser and colleagues at Stockholm University and the Karolinska Institute in Stockholm, Sweden, show that the enzyme, presequence protease (PreP, also known as hMP1) cleaves Aβ in vitro and also degrades Aβ added to human brain mitochondrial extracts.

It remains to be seen if PreP regulates Aβ levels in vivo, like the other two Aβ proteases neprilysin and insulin-degrading enzyme (IDE). If this turns out to be the case, then PreP could be an antidote specific to mitochondrial Aβ build-up, which has recently been getting attention for its possible role as an early inducer of oxidative stress in neurons (Caspersen et al., 2005; Manczak et al., 2006).

PreP, which Glaser and colleagues first identified in, of all things, the plant Arabadopsis thaliana, is a zinc metalloprotease which belongs to the same large family of pitrilysins as IDE. PreP functions to clear the mitochondria of the targeting sequences cleaved from proteins that have been imported into mitochondria. Since PreP preferentially degrades short, unstructured peptides, the researchers thought it might also handle Aβ.

Using purified, recombinant human PreP, joint first authors Annelie Falkevall and Nyosha Alikhani showed that the enzyme degraded Aβ1-40, Aβ1-42, and the highly amyloidogenic Aβ artic, producing a unique set of cleavage fragments compared to IDE and neprilysin products. Consistent with its specificity for small, unstructured peptides, PreP did not degrade native insulin, but did chew up isolated insulin β chains. They localized the activity to mitochondria in human brain fractions, and showed that PreP resided in the mitochondrial matrix in rat mitochondria. PreP appeared to be the principal Aβ protease in that fraction based on antibody inhibition experiments.

While the mitochondria matrix may seem an odd location for an Aβ-degrading enzyme, recent studies show that Aβ does accumulate in mitochondria. A high-profile report two years ago suggested that mitochondrial Aβ causes oxidative stress and cell death via inhibition of the Aβ-binding alcohol dehydrogenase (ABAD, see ARF related news story). In the current paper, Glaser and colleagues show that human PreP is completely inhibited under oxidizing conditions, raising the (highly speculative) possibility that Aβ could interfere with its own degradation in mitochondria.—Pat McCaffrey.

Reference:
Falkevall A, Alikhani N, Bhushan S, Pavlov PF, Busch K, Johnson KA, Eneqvist T, Tjernberg L, Ankarcrona M, Glaser E. Degradation of the amyloid–beta protein by the novel mitochondrial peptidasome, PreP. J Biol Chem. 2006 Jul 18; [Epub ahead of print] Abstract

 
Comments on News and Primary Papers
  Primary Papers: Degradation of the amyloid beta-protein by the novel mitochondrial peptidasome, PreP.

Comment by:  Andre Delacourte
Submitted 26 July 2006  |  Permalink Posted 26 July 2006
  I recommend this paper

  Primary Papers: Degradation of the amyloid beta-protein by the novel mitochondrial peptidasome, PreP.

Comment by:  Charles Glabe, ARF Advisor
Submitted 25 July 2006  |  Permalink Posted 26 July 2006
  I recommend this paper

It is surprising and unanticipated that a mitochondrial matrix peptidase would play a role in degrading Aβ. It begs the question of how Aβ, which is normally considered to be a secreted protein, would be mislocalized to the mitochondria matrix.

View all comments by Charles Glabe

  Comment by:  P. Hemachandra Reddy
Submitted 28 July 2006  |  Permalink Posted 28 July 2006

This JBC paper by Falkevall and colleagues supports the hypothesis that Aβ enters mitochondria, induces free radicals, and causes oxidative damage early in the progression of Alzheimer disease (Falkevall et al., 2006; Caspersen et al., 2005; Manczak et al., 2006). Findings from this paper are particularly useful in improving our understanding of the degradation of Aβ targeted to mitochondria. In their paper, Falkevall et al. found that mitochondrial peptidasome (or PreP) is localized to the mitochondrial matrix, and is capable of degrading neurotoxic Aβ peptides (1-40 and 1-42).

Although mitochondrial dysfunction has been described in aging and Alzheimer disease for the last 15-20 years by several groups (including Bruce Ames, Flint Beal, John Blass, Gary Gibson, George Perry, Mark Smith, Russell Swerdlow, Doug Wallace, and others), recent studies by Caspersen et al. (2005), Crouch et al. (2005), Lustbader et al. (2004), and Manczak et al. (2006) have focused on the precise connection between Aβ and mitochondria.

In support of the hypothesis that Aβ is imported into...  Read more


  Comment by:  Malcolm Leissring
Submitted 31 July 2006  |  Permalink Posted 1 August 2006
  I recommend the Primary Papers

Our group recently discovered that insulin-degrading enzyme (IDE) itself is targeted to mitochondria, as well (Leissring et al., 2004). This mitochondrial isoform of IDE is generated by alternative translation initiation at an upstream codon.

At the time we published this, it was certainly tempting to speculate that Aβ-degrading proteases present in mitochondria could serve some protective function; however, we did not want to make too much of this absent more convincing evidence that Aβ was actually present in mitochondria. In the intervening years, however, more and more evidence has accumulated to suggest this may very well be the case, as discussed in many of the previous comments above. There are certainly many experiments to do on this interesting topic.

References:
Leissring MA, Farris W, Wu X, Christodoulou DC, Haigis MC, Guarente L & Selkoe DJ. Alternative initiation of translation generates a novel isoform of insulin-degrading enzyme targeted to mitochondria. Biochem J. 2004 Nov 1;383(Pt. 3):439-46. Abstract

View all comments by Malcolm Leissring


  Comment by:  Xi Chen, Shirley ShiDu Yan
Submitted 6 August 2006  |  Permalink Posted 6 August 2006

An Intramitochondrial Aβ-cleaving Peptidase
After identifying human PreP, a mitochondrial zinc-binding metalloendopeptidase that degrades targeting peptides as well as other unstructured peptides within mitochondria, these authors further demonstrated that PreP is able to cleave amyloid peptide (Aβ). Unlike the previously identified mitochondrial ATP-dependent proteases which degrade large, aggregated proteins, PreP uniquely targets peptides up to 70 amino acid residues. Since increasing data have suggested that Aβ accumulates within mitochondria and causes mitochondrial dysfunction, identifying a novel intramitochondrial peptidase capable of degrading Aβ has an important implication in understanding the pathogenesis of Alzheimer disease (AD). We can presume that aging-associated decline of PreP activity due to such causes as oxidative stress, mitochondrial permeability transition, or calcium dysregulation may be an important mechanism leading to impaired “waste removal” within mitochondria in AD, suggesting that protecting or enhancing this enzyme’s activity may be...  Read more
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